Table 2

List of gene targets selected for TaqMan® Validation in cohort 2

Gene Symbol
Probe ID
P value
Array fold change
Expression in recurrent vs primary
Assay ID

S100A8
196494
0.034
11.6
Upregulated
Hs00374263_m1
ZNF218
217273
0.002
6.06
Upregulated
Hs00542836_m1
MMP9
112640
0.0169
4.975
Upregulated
Hs00234579_m1
IL1R2
186009
0.038
4.46
Upregulated
Hs00174759_m1
SEPTIN6
122775
0.019
4.16
Upregulated
Hs00248408_m1
NRG2
170215
0.013
3.6
Upregulated
Hs00171706_m1
SPDEF
155169
0.005
2.87
Upregulated
Hs00171942_m1
TJP3
182089
0.013
2.7
Upregulated
Hs00274276_m1
FGF2
113042
0.03
2.7
Upregulated
Hs00266645_m1
FOXF1
145754
0.0015
6.58
Downregulated
Hs00230962_m1

Laios et al. Molecular Cancer 2008 7:8   doi:10.1186/1476-4598-7-8